Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin family protein | DDQ68_RS13265 | Not Available | Positive | 2975328 - 2975927 | 21786.8 |
| hypothetical protein | DDQ68_RS13270 | Not Available | Positive | 2976025 - 2976387 | 13159.1 |
| helix-turn-helix domain-containing protein | DDQ68_RS13275 | Not Available | Positive | 2976392 - 2976961 | 21225.6 |
| four-helix bundle copper-binding protein | DDQ68_RS13280 | Not Available | Negative | 2977068 - 2977409 | 12296.9 |
| hypothetical protein | DDQ68_RS13285 | Not Available | Positive | 2977611 - 2979095 | 53492.7 |
| b12-binding domain-containing radical sam protein | DDQ68_RS13290 | Not Available | Positive | 2979357 - 2981561 | 81823.1 |
| class i sam-dependent methyltransferase | DDQ68_RS13295 | Not Available | Positive | 2981648 - 2982562 | 32427.7 |
| hypothetical protein | DDQ68_RS13300 | Not Available | Negative | 2982730 - 2983767 | 34660.8 |
| gnat family n-acetyltransferase | DDQ68_RS13305 | Not Available | Negative | 2983836 - 2984384 | 19482.4 |
| hypothetical protein | DDQ68_RS13310 | Not Available | Negative | 2984436 - 2984708 | 9658.36 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
