Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DDQ68_RS13215 | Not Available | Positive | 2963977 - 2966433 | 89130.4 |
| hypothetical protein | DDQ68_RS13220 | Not Available | Positive | 2966550 - 2967023 | 16801.9 |
| hypothetical protein | DDQ68_RS13225 | Not Available | Positive | 2967094 - 2967351 | 9769.56 |
| vit1/ccc1 transporter family protein | DDQ68_RS13230 | Not Available | Positive | 2967442 - 2968146 | 24479.6 |
| susc/raga family tonb-linked outer membrane protein | DDQ68_RS13235 | Not Available | Positive | 2968327 - 2971530 | 113590.0 |
| ragb/susd family nutrient uptake outer membrane protein | DDQ68_RS13240 | Not Available | Positive | 2971552 - 2972850 | 45724.5 |
| heme-binding protein | DDQ68_RS23910 | Not Available | Positive | 2973263 - 2973562 | 10341.7 |
| transporter | DDQ68_RS13250 | Not Available | Positive | 2973573 - 2974433 | 32106.8 |
| hypothetical protein | DDQ68_RS13255 | Not Available | Negative | 2974575 - 2974841 | 9140.6 |
| hypothetical protein | DDQ68_RS13260 | Not Available | Negative | 2974899 - 2975183 | 9879.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
