Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h:quinone oxidoreductase | DDQ68_RS13075 | Not Available | Negative | 2922006 - 2922617 | 21586.6 |
| rna polymerase sigma factor | DDQ68_RS13080 | Not Available | Positive | 2922916 - 2923545 | 23681.3 |
| hypothetical protein | DDQ68_RS13085 | Not Available | Positive | 2923574 - 2925217 | 56216.5 |
| duf6970 domain-containing protein | DDQ68_RS13090 | Not Available | Positive | 2925290 - 2925655 | 13176.8 |
| excinuclease abc subunit uvrb | DDQ68_RS13095 | Not Available | Positive | 2925763 - 2927805 | 76665.6 |
| susc/raga family tonb-linked outer membrane protein | DDQ68_RS13100 | Not Available | Positive | 2928185 - 2931568 | 119504.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DDQ68_RS13105 | Not Available | Positive | 2931613 - 2933049 | 50541.5 |
| sigma-54-dependent transcriptional regulator | DDQ68_RS13110 | Not Available | Positive | 2933160 - 2934527 | 49202.4 |
| hypothetical protein | DDQ68_RS13115 | Not Available | Positive | 2934923 - 2935276 | 12651.1 |
| hypothetical protein | DDQ68_RS13120 | Not Available | Negative | 2935357 - 2935668 | 11308.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
