Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s21 | DDQ68_RS13025 | Not Available | Negative | 2910879 - 2911073 | 7658.47 |
| acyl-coa dehydrogenase | DDQ68_RS13030 | Not Available | Negative | 2911172 - 2912311 | 41011.0 |
| polysaccharide biosynthesis/export family protein | DDQ68_RS13035 | Not Available | Positive | 2912562 - 2913467 | 32439.3 |
| polysaccharide biosynthesis tyrosine autokinase | DDQ68_RS13040 | Not Available | Positive | 2913542 - 2916046 | 92362.8 |
| tyrosine-protein phosphatase | DDQ68_RS13045 | Not Available | Positive | 2916074 - 2916856 | 28770.8 |
| nad-dependent epimerase/dehydratase family protein | DDQ68_RS13050 | Not Available | Positive | 2916860 - 2917846 | 34956.3 |
| tetratricopeptide repeat protein | DDQ68_RS13055 | Not Available | Positive | 2918027 - 2919424 | 54075.8 |
| phosphosulfolactate synthase | DDQ68_RS13060 | Not Available | Positive | 2919530 - 2920360 | 31022.4 |
| deda family protein | DDQ68_RS13065 | Not Available | Positive | 2920502 - 2921164 | 24485.5 |
| shikimate dehydrogenase family protein | DDQ68_RS13070 | Not Available | Positive | 2921188 - 2921934 | 26858.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
