Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit beta | DDQ68_RS12875 | Not Available | Negative | 2884505 - 2888407 | 145913.0 |
| 50s ribosomal protein l7/l12 | DDQ68_RS12880 | Not Available | Negative | 2888661 - 2889041 | 13043.8 |
| 50s ribosomal protein l10 | DDQ68_RS12885 | Not Available | Negative | 2889109 - 2889657 | 20029.1 |
| 50s ribosomal protein l1 | DDQ68_RS12890 | Not Available | Negative | 2889673 - 2890371 | 24799.2 |
| 50s ribosomal protein l11 | DDQ68_RS12895 | Not Available | Negative | 2890390 - 2890833 | 15864.3 |
| transcription termination/antitermination protein nusg | DDQ68_RS12900 | Not Available | Negative | 2890953 - 2891516 | 21013.4 |
| preprotein translocase subunit sece | DDQ68_RS12905 | Not Available | Negative | 2891531 - 2891725 | 7168.75 |
| Trna-trp | Not Available | Not Available | Positive | 2891788 - 2891858 | Not Available |
| elongation factor tu | DDQ68_RS12915 | Not Available | Negative | 2891977 - 2893167 | 43296.3 |
| Trna-thr | Not Available | Not Available | Positive | 2893327 - 2893398 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
