Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l2 | DDQ68_RS12825 | Not Available | Negative | 2873043 - 2873870 | 29671.1 |
| 50s ribosomal protein l23 | DDQ68_RS12830 | Not Available | Negative | 2873903 - 2874190 | 10561.9 |
| 50s ribosomal protein l4 | DDQ68_RS12835 | Not Available | Negative | 2874190 - 2874828 | 23255.3 |
| 50s ribosomal protein l3 | DDQ68_RS12840 | Not Available | Negative | 2874841 - 2875461 | 21910.8 |
| 30s ribosomal protein s10 | DDQ68_RS12845 | Not Available | Negative | 2875701 - 2876006 | 11353.0 |
| elongation factor g | DDQ68_RS12850 | Not Available | Negative | 2876046 - 2878184 | 78703.5 |
| 30s ribosomal protein s7 | DDQ68_RS12855 | Not Available | Negative | 2878296 - 2878763 | 17922.0 |
| 30s ribosomal protein s12 | DDQ68_RS12860 | Not Available | Negative | 2878859 - 2879290 | 15403.9 |
| duf3467 domain-containing protein | DDQ68_RS12865 | Not Available | Negative | 2879407 - 2879727 | 11664.9 |
| dna-directed rna polymerase subunit beta' | DDQ68_RS12870 | Not Available | Negative | 2879841 - 2884193 | 161044.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
