Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is5/is1182 family transposase | DDQ68_RS12725 | Not Available | Positive | 2863561 - 2864414 | 30142.0 |
| is5/is1182 family transposase | DDQ68_RS12730 | Not Available | Negative | 2864443 - 2864682 | 9372.19 |
| is5/is1182 family transposase | DDQ68_RS23900 | Not Available | Negative | 2864795 - 2865112 | 11843.0 |
| integrase core domain-containing protein | DDQ68_RS12740 | Not Available | Negative | 2865279 - 2865656 | 13918.5 |
| is3 family transposase | DDQ68_RS12745 | Not Available | Negative | 2865699 - 2866124 | 15790.0 |
| transposase | DDQ68_RS12750 | Not Available | Negative | 2866121 - 2866426 | 11316.8 |
| is5/is1182 family transposase | DDQ68_RS23905 | Not Available | Negative | 2866482 - 2866986 | 18050.9 |
| is1 family transposase | DDQ68_RS22885 | Not Available | Positive | 2867132 - 2867446 | 11116.4 |
| is1 family transposase | DDQ68_RS12765 | Not Available | Positive | 2867466 - 2867855 | 15097.5 |
| transposase | DDQ68_RS12770 | Not Available | Negative | 2867966 - 2868667 | 26083.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
