Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | DDQ68_RS12620 | Not Available | Negative | 2850223 - 2851284 | 38728.2 |
| is5/is1182 family transposase | DDQ68_RS24435 | Not Available | Negative | 2851354 - 2851677 | 11192.0 |
| erythromycin esterase family protein | DDQ68_RS12635 | Not Available | Negative | 2852107 - 2853396 | 47238.3 |
| 50s ribosomal protein l17 | DDQ68_RS12640 | Not Available | Negative | 2853602 - 2854201 | 21537.6 |
| dna-directed rna polymerase subunit alpha | DDQ68_RS12645 | Not Available | Negative | 2854362 - 2855351 | 37111.8 |
| 30s ribosomal protein s4 | DDQ68_RS12650 | Not Available | Negative | 2855448 - 2856053 | 22783.6 |
| 30s ribosomal protein s11 | DDQ68_RS12655 | Not Available | Negative | 2856080 - 2856472 | 14151.3 |
| 30s ribosomal protein s13 | DDQ68_RS12660 | Not Available | Negative | 2856560 - 2856937 | 13926.1 |
| 50s ribosomal protein l36 | DDQ68_RS12665 | Not Available | Negative | 2857041 - 2857157 | 4548.76 |
| translation initiation factor if-1 | DDQ68_RS12670 | Not Available | Negative | 2857165 - 2857383 | 8293.27 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
