Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan d,d-transpeptidase ftsi family protein | DDQ68_RS12520 | Not Available | Negative | 2828236 - 2830125 | 68242.1 |
| class i sam-dependent methyltransferase | DDQ68_RS12525 | Not Available | Positive | 2830326 - 2831210 | 33615.0 |
| hypothetical protein | DDQ68_RS12530 | Not Available | Negative | 2831471 - 2831881 | 14666.2 |
| hypothetical protein | DDQ68_RS12535 | Not Available | Negative | 2831854 - 2832162 | 11346.8 |
| phosphatase | DDQ68_RS12540 | Not Available | Positive | 2832257 - 2833198 | 33835.3 |
| m56 family metallopeptidase | DDQ68_RS12545 | Not Available | Negative | 2833415 - 2834767 | 47805.3 |
| blai/meci/copy family transcriptional regulator | DDQ68_RS12550 | Not Available | Negative | 2834764 - 2835195 | 15495.3 |
| ldh family oxidoreductase | DDQ68_RS12555 | Not Available | Positive | 2835566 - 2836639 | 37145.6 |
| murein l,d-transpeptidase catalytic domain family protein | DDQ68_RS12560 | Not Available | Negative | 2836832 - 2837677 | 30522.5 |
| murein l,d-transpeptidase catalytic domain family protein | DDQ68_RS12565 | Not Available | Negative | 2837848 - 2838669 | 28928.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
