Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| family 43 glycosylhydrolase | DDQ68_RS01180 | Not Available | Positive | 286772 - 288223 | 53961.5 |
| gh92 family glycosyl hydrolase | DDQ68_RS01185 | Not Available | Negative | 288376 - 290829 | 90633.5 |
| class i mannose-6-phosphate isomerase | DDQ68_RS01190 | Not Available | Positive | 291053 - 292804 | 64188.3 |
| deor/glpr family dna-binding transcription regulator | DDQ68_RS01195 | Not Available | Positive | 292843 - 293643 | 28681.6 |
| sugar porter family mfs transporter | DDQ68_RS01200 | Not Available | Positive | 293813 - 295234 | 49343.0 |
| glycoside hydrolase family 28 protein | DDQ68_RS01205 | Not Available | Positive | 295310 - 296932 | 57849.1 |
| glycosyl hydrolase | DDQ68_RS01210 | Not Available | Positive | 296968 - 297987 | 38934.0 |
| hypothetical protein | DDQ68_RS01215 | Not Available | Positive | 298081 - 299052 | 37000.0 |
| pyridoxal phosphate-dependent aminotransferase | DDQ68_RS01220 | Not Available | Negative | 299410 - 300438 | 37548.8 |
| cobyric acid synthase | DDQ68_RS01225 | Not Available | Negative | 300616 - 302088 | 52341.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
