Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | DDQ68_RS12385 | Not Available | Negative | 2796279 - 2796854 | 21737.6 |
| transposase | DDQ68_RS12390 | Not Available | Negative | 2797868 - 2798404 | 20121.9 |
| helix-turn-helix domain-containing protein | DDQ68_RS12395 | Not Available | Negative | 2798410 - 2798898 | 17607.1 |
| tsup family transporter | DDQ68_RS12400 | Not Available | Positive | 2799097 - 2800389 | 45430.7 |
| kila-n domain-containing protein | DDQ68_RS12405 | Not Available | Negative | 2800512 - 2801531 | 38129.8 |
| is1595 family transposase | DDQ68_RS12410 | Not Available | Negative | 2801681 - 2802598 | 34815.8 |
| hypothetical protein | DDQ68_RS12415 | Not Available | Positive | 2802711 - 2802899 | 7093.32 |
| hypothetical protein | DDQ68_RS24775 | Not Available | Positive | 2802934 - 2803056 | 4449.33 |
| aldehyde dehydrogenase family protein | DDQ68_RS12425 | Not Available | Negative | 2803242 - 2804852 | 56936.2 |
| m16 family metallopeptidase | DDQ68_RS12430 | Not Available | Positive | 2805047 - 2808079 | 109805.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
