Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s2 | DDQ68_RS12240 | Not Available | Positive | 2768768 - 2769535 | 28394.6 |
| translation elongation factor ts | DDQ68_RS12245 | Not Available | Positive | 2769637 - 2770473 | 29601.4 |
| duf6624 domain-containing protein | DDQ68_RS12250 | Not Available | Negative | 2770876 - 2771493 | 23184.0 |
| duf3089 domain-containing protein | DDQ68_RS12255 | Not Available | Negative | 2771556 - 2772629 | 40054.4 |
| hypothetical protein | DDQ68_RS12260 | Not Available | Negative | 2772903 - 2774084 | 40581.2 |
| hypothetical protein | DDQ68_RS12265 | Not Available | Negative | 2774098 - 2774832 | 26954.9 |
| hypothetical protein | DDQ68_RS12270 | Not Available | Negative | 2774942 - 2775196 | 9564.52 |
| hypothetical protein | DDQ68_RS12275 | Not Available | Positive | 2775330 - 2775521 | 6889.98 |
| is5/is1182 family transposase | DDQ68_RS12280 | Not Available | Positive | 2775793 - 2776071 | 9857.31 |
| cupredoxin domain-containing protein | DDQ68_RS12285 | Not Available | Positive | 2776400 - 2776651 | 9477.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
