Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type b 50s ribosomal protein l31 | DDQ68_RS11950 | Not Available | Negative | 2709362 - 2709631 | 10309.1 |
| hypothetical protein | DDQ68_RS11955 | Not Available | Positive | 2709915 - 2710286 | 13350.0 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | DDQ68_RS11960 | Not Available | Positive | 2710347 - 2710928 | 20447.0 |
| uridine kinase | DDQ68_RS11965 | Not Available | Positive | 2711005 - 2711628 | 23466.0 |
| uma2 family endonuclease | DDQ68_RS11970 | Not Available | Positive | 2711651 - 2712259 | 22834.0 |
| duf4268 domain-containing protein | DDQ68_RS11975 | Not Available | Positive | 2712270 - 2712731 | 17411.7 |
| hypothetical protein | DDQ68_RS11980 | Not Available | Positive | 2712796 - 2713170 | 13093.4 |
| protein translocase subunit secdf | DDQ68_RS11985 | Not Available | Positive | 2713303 - 2716308 | 107961.0 |
| nifu family protein | DDQ68_RS11990 | Not Available | Negative | 2716468 - 2717070 | 21417.4 |
| chorismate synthase | DDQ68_RS11995 | Not Available | Negative | 2717429 - 2718508 | 38037.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
