Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin--[acetyl-coa-carboxylase] ligase | DDQ68_RS11815 | Not Available | Positive | 2676553 - 2677311 | 27144.6 |
| t9ss type a sorting domain-containing protein | DDQ68_RS11820 | Not Available | Positive | 2677463 - 2677840 | 13190.2 |
| duf2723 domain-containing protein | DDQ68_RS11825 | Not Available | Positive | 2678166 - 2681165 | 112605.0 |
| glycosyltransferase family 9 protein | DDQ68_RS11830 | Not Available | Negative | 2681388 - 2682614 | 44069.1 |
| o-antigen ligase family protein | DDQ68_RS11835 | Not Available | Negative | 2682763 - 2684028 | 46575.3 |
| gwxtd domain-containing protein | DDQ68_RS11840 | Not Available | Positive | 2684770 - 2686044 | 45837.1 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | DDQ68_RS11845 | Not Available | Positive | 2685990 - 2687078 | 39685.2 |
| mannose-1-phosphate guanylyltransferase | DDQ68_RS11850 | Not Available | Negative | 2687476 - 2688558 | 40027.6 |
| kpsf/gutq family sugar-phosphate isomerase | DDQ68_RS11855 | Not Available | Negative | 2688604 - 2689608 | 34841.3 |
| dna helicase recq | DDQ68_RS11860 | Not Available | Positive | 2689965 - 2692172 | 82462.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
