Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin | DDQ68_RS11525 | Not Available | Positive | 2608553 - 2608882 | 11833.3 |
| hypothetical protein | DDQ68_RS11530 | Not Available | Positive | 2609099 - 2609509 | 14168.1 |
| spfh domain-containing protein | DDQ68_RS11535 | Not Available | Positive | 2609685 - 2611583 | 67993.7 |
| protein-disulfide reductase dsbd family protein | DDQ68_RS11540 | Not Available | Negative | 2611920 - 2614112 | 77988.2 |
| hemolysin family protein | DDQ68_RS11545 | Not Available | Positive | 2614295 - 2615596 | 48010.1 |
| hypothetical protein | DDQ68_RS11550 | Not Available | Negative | 2615706 - 2616275 | 18662.0 |
| transposase family protein | DDQ68_RS11555 | Not Available | Positive | 2616493 - 2616996 | 18834.4 |
| transposase family protein | DDQ68_RS11560 | Not Available | Positive | 2617002 - 2617442 | 16385.1 |
| is1 family transposase | DDQ68_RS22825 | Not Available | Positive | 2617882 - 2618196 | 11116.4 |
| is1 family transposase | DDQ68_RS11570 | Not Available | Positive | 2618216 - 2618605 | 15097.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
