Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydg/sra domain-containing protein | DDQ68_RS11475 | Not Available | Positive | 2594050 - 2594949 | 32237.3 |
| ydg/sra domain-containing protein | DDQ68_RS11480 | Not Available | Positive | 2594963 - 2595406 | 16667.3 |
| o-methyltransferase | DDQ68_RS11485 | Not Available | Positive | 2595720 - 2596358 | 23269.4 |
| outer membrane beta-barrel protein | DDQ68_RS11490 | Not Available | Positive | 2596430 - 2599360 | 104572.0 |
| lysm peptidoglycan-binding domain-containing protein | DDQ68_RS11495 | Not Available | Positive | 2599482 - 2601620 | 75284.3 |
| hypothetical protein | DDQ68_RS11500 | Not Available | Positive | 2601865 - 2602146 | 10138.2 |
| m20/m25/m40 family metallo-hydrolase | DDQ68_RS11505 | Not Available | Positive | 2602171 - 2602320 | 5481.4 |
| m20/m25/m40 family metallo-hydrolase | DDQ68_RS11510 | Not Available | Positive | 2602420 - 2603208 | 27806.8 |
| fatty acid desaturase family protein | DDQ68_RS11515 | Not Available | Negative | 2603274 - 2604335 | 40545.5 |
| dna polymerase iii subunit alpha | DDQ68_RS11520 | Not Available | Positive | 2604705 - 2608388 | 138747.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
