Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination factor rho | DDQ68_RS11380 | Not Available | Negative | 2571119 - 2573377 | 82327.2 |
| serine--trna ligase | DDQ68_RS11385 | Not Available | Positive | 2573713 - 2574987 | 46637.7 |
| hypothetical protein | DDQ68_RS11390 | Not Available | Negative | 2575445 - 2575723 | 10055.4 |
| glycosyltransferase family 9 protein | DDQ68_RS11395 | Not Available | Negative | 2575823 - 2576884 | 39180.6 |
| helix-hairpin-helix domain-containing protein | DDQ68_RS11400 | Not Available | Negative | 2576959 - 2578719 | 64534.1 |
| hypothetical protein | DDQ68_RS11405 | Not Available | Positive | 2578834 - 2579235 | 14663.3 |
| alpha-amylase family glycosyl hydrolase | DDQ68_RS11410 | Not Available | Positive | 2579392 - 2581284 | 70199.2 |
| mfs transporter | DDQ68_RS11415 | Not Available | Positive | 2581349 - 2582755 | 50993.5 |
| thioredoxin family protein | DDQ68_RS11420 | Not Available | Positive | 2582852 - 2583337 | 16905.5 |
| llm class flavin-dependent oxidoreductase | DDQ68_RS11425 | Not Available | Negative | 2583438 - 2584490 | 37856.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
