Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa carboxylase subunit beta | DDQ68_RS11225 | Not Available | Negative | 2541349 - 2542983 | 58521.9 |
| mlad family protein | DDQ68_RS11230 | Not Available | Negative | 2543156 - 2544166 | 35754.1 |
| n-acetylmuramoyl-l-alanine amidase | DDQ68_RS11235 | Not Available | Negative | 2544254 - 2545069 | 29683.3 |
| putative lps assembly protein lptd | DDQ68_RS11240 | Not Available | Positive | 2545131 - 2548154 | 110074.0 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | DDQ68_RS11245 | Not Available | Positive | 2548223 - 2549038 | 29649.0 |
| rlua family pseudouridine synthase | DDQ68_RS11250 | Not Available | Positive | 2549193 - 2549903 | 26416.2 |
| acyl-coa desaturase | DDQ68_RS11255 | Not Available | Positive | 2550126 - 2550899 | 30458.7 |
| 30s ribosomal protein s16 | DDQ68_RS11260 | Not Available | Positive | 2551298 - 2551846 | 19860.3 |
| ribosome maturation factor rimm | DDQ68_RS11265 | Not Available | Positive | 2551939 - 2552514 | 21458.8 |
| trna (guanosine(37)-n1)-methyltransferase trmd | DDQ68_RS11270 | Not Available | Positive | 2552530 - 2553219 | 25207.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
