Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is5/is1182 family transposase | DDQ68_RS24170 | Not Available | Negative | 249583 - 249876 | 9319.91 |
| sensor histidine kinase | DDQ68_RS01040 | Not Available | Negative | 250139 - 251554 | 51101.6 |
| nadp-dependent isocitrate dehydrogenase | DDQ68_RS01045 | Not Available | Positive | 251948 - 253420 | 53648.5 |
| tetr/acrr family transcriptional regulator | DDQ68_RS01050 | Not Available | Positive | 253514 - 254194 | 26026.1 |
| response regulator transcription factor | DDQ68_RS01055 | Not Available | Negative | 254493 - 255170 | 25071.6 |
| gaf domain-containing protein | DDQ68_RS01060 | Not Available | Positive | 255293 - 256027 | 26246.4 |
| amino acid permease | DDQ68_RS01065 | Not Available | Positive | 256421 - 257884 | 52143.7 |
| secondary thiamine-phosphate synthase enzyme yjbq | DDQ68_RS01070 | Not Available | Negative | 258054 - 258473 | 15632.7 |
| cpbp family intramembrane glutamic endopeptidase | DDQ68_RS01075 | Not Available | Positive | 258670 - 259557 | 31377.3 |
| type ia dna topoisomerase | DDQ68_RS01080 | Not Available | Positive | 259691 - 262258 | 93848.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
