Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf418 domain-containing protein | DDQ68_RS11045 | Not Available | Negative | 2500587 - 2501744 | 42003.9 |
| hypothetical protein | DDQ68_RS23460 | Not Available | Negative | 2501840 - 2502031 | 6477.78 |
| ankyrin repeat domain-containing protein | DDQ68_RS11055 | Not Available | Negative | 2502585 - 2503091 | 17582.8 |
| sdr family oxidoreductase | DDQ68_RS11060 | Not Available | Negative | 2503307 - 2504476 | 40529.4 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DDQ68_RS11065 | Not Available | Positive | 2504740 - 2505912 | 41928.1 |
| rip metalloprotease rsep | DDQ68_RS11070 | Not Available | Positive | 2506019 - 2507362 | 48980.3 |
| duf6702 family protein | DDQ68_RS11075 | Not Available | Positive | 2507541 - 2508050 | 18364.2 |
| duf2461 domain-containing protein | DDQ68_RS11080 | Not Available | Negative | 2508158 - 2508823 | 24595.2 |
| pd40 domain-containing protein | DDQ68_RS11085 | Not Available | Positive | 2509060 - 2510187 | 39884.6 |
| duf4197 domain-containing protein | DDQ68_RS11090 | Not Available | Positive | 2510375 - 2511133 | 26691.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
