Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endopeptidase la | DDQ68_RS10945 | Not Available | Negative | 2477419 - 2479845 | 89599.3 |
| ompa family protein | DDQ68_RS10950 | Not Available | Positive | 2480141 - 2482168 | 75974.0 |
| doxx family protein | DDQ68_RS10955 | Not Available | Negative | 2482204 - 2482494 | 10383.5 |
| doxx family protein | DDQ68_RS10960 | Not Available | Negative | 2482539 - 2482889 | 12794.2 |
| 3-oxoacyl-acp synthase | DDQ68_RS10965 | Not Available | Negative | 2483163 - 2483621 | 15809.8 |
| hypothetical protein | DDQ68_RS10970 | Not Available | Positive | 2483828 - 2484676 | 29933.1 |
| hypothetical protein | DDQ68_RS10975 | Not Available | Positive | 2484782 - 2485462 | 24794.4 |
| hypothetical protein | DDQ68_RS10980 | Not Available | Positive | 2485729 - 2486193 | 17967.5 |
| sensor histidine kinase | DDQ68_RS10985 | Not Available | Positive | 2486172 - 2486984 | 29077.6 |
| response regulator transcription factor | DDQ68_RS10990 | Not Available | Positive | 2487025 - 2487690 | 24411.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
