Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 2 | DDQ68_RS10895 | Not Available | Positive | 2461154 - 2462231 | 40603.9 |
| susc/raga family tonb-linked outer membrane protein | DDQ68_RS10900 | Not Available | Positive | 2462659 - 2465871 | 114918.0 |
| ragb/susd family nutrient uptake outer membrane protein | DDQ68_RS10905 | Not Available | Positive | 2465892 - 2467277 | 49457.1 |
| is630 family transposase | DDQ68_RS10910 | Not Available | Negative | 2467710 - 2468417 | 26700.2 |
| helix-turn-helix domain-containing protein | DDQ68_RS24760 | Not Available | Negative | 2468398 - 2468724 | 11490.1 |
| susc/raga family tonb-linked outer membrane protein | DDQ68_RS10920 | Not Available | Positive | 2469052 - 2472195 | 112089.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DDQ68_RS10925 | Not Available | Positive | 2472350 - 2473741 | 50033.7 |
| hypothetical protein | DDQ68_RS10930 | Not Available | Positive | 2473777 - 2474391 | 21894.2 |
| atp-dependent protease atpase subunit hslu | DDQ68_RS10935 | Not Available | Negative | 2474671 - 2476095 | 52336.0 |
| type ix secretion system protein porq | DDQ68_RS10940 | Not Available | Negative | 2476266 - 2477315 | 36777.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
