Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DDQ68_RS10795 | Not Available | Negative | 2439133 - 2442216 | 109781.0 |
| ribonuclease d | DDQ68_RS10800 | Not Available | Positive | 2442446 - 2443618 | 43659.2 |
| endolytic transglycosylase mltg | DDQ68_RS10805 | Not Available | Positive | 2443896 - 2444906 | 37708.4 |
| hypothetical protein | DDQ68_RS10810 | Not Available | Negative | 2445086 - 2446651 | 57337.1 |
| d-aminoacyl-trna deacylase | DDQ68_RS10815 | Not Available | Positive | 2446749 - 2447198 | 15495.9 |
| nucleotide pyrophosphohydrolase | DDQ68_RS10820 | Not Available | Positive | 2447327 - 2447653 | 12256.5 |
| 2-phosphosulfolactate phosphatase | DDQ68_RS10825 | Not Available | Negative | 2447747 - 2448466 | 25363.6 |
| glycine cleavage system aminomethyltransferase gcvt | DDQ68_RS10830 | Not Available | Negative | 2448668 - 2449774 | 39607.3 |
| czb domain-containing protein | DDQ68_RS10835 | Not Available | Positive | 2449878 - 2450246 | 13498.4 |
| sensor histidine kinase | DDQ68_RS10840 | Not Available | Positive | 2450291 - 2451838 | 57234.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
