Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | DDQ68_RS10440 | Not Available | Negative | 2346665 - 2347678 | 35474.2 |
| translocation/assembly module tamb domain-containing protein | DDQ68_RS10445 | Not Available | Positive | 2347907 - 2352472 | 165934.0 |
| cell division protein ftsx | DDQ68_RS10450 | Not Available | Positive | 2352667 - 2353551 | 32724.4 |
| duf3098 domain-containing protein | DDQ68_RS10455 | Not Available | Positive | 2353561 - 2353896 | 11578.2 |
| undecaprenyl-diphosphate phosphatase | DDQ68_RS10460 | Not Available | Positive | 2354143 - 2354973 | 30155.1 |
| trna pseudouridine(55) synthase trub | DDQ68_RS10465 | Not Available | Positive | 2355174 - 2356022 | 30320.1 |
| bifunctional riboflavin kinase/fad synthetase | DDQ68_RS10470 | Not Available | Positive | 2356099 - 2357046 | 34541.4 |
| carboxypeptidase-like regulatory domain-containing protein | DDQ68_RS10475 | Not Available | Positive | 2357253 - 2358566 | 48277.9 |
| coa transferase subunit a | DDQ68_RS10480 | Not Available | Positive | 2358563 - 2359264 | 25111.3 |
| serine hydrolase domain-containing protein | DDQ68_RS10485 | Not Available | Positive | 2359366 - 2360661 | 46394.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
