Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-cys | Not Available | Not Available | Positive | 2337478 - 2337548 | Not Available |
| 30s ribosomal protein s1 | DDQ68_RS10390 | Not Available | Negative | 2337682 - 2339649 | 72132.7 |
| is5 family transposase | DDQ68_RS10400 | Not Available | Negative | 2340242 - 2341072 | 31636.0 |
| abrb/maze/spovt family dna-binding domain-containing protein | DDQ68_RS10405 | Not Available | Positive | 2341274 - 2341525 | 9066.88 |
| type ii toxin-antitoxin system pemk/mazf family toxin | DDQ68_RS10410 | Not Available | Positive | 2341555 - 2341857 | 11091.5 |
| alpha/beta fold hydrolase | DDQ68_RS10415 | Not Available | Positive | 2342020 - 2342862 | 30393.2 |
| duf3298 and duf4163 domain-containing protein | DDQ68_RS10420 | Not Available | Negative | 2342943 - 2344154 | 43148.3 |
| hnh endonuclease | DDQ68_RS10425 | Not Available | Negative | 2344434 - 2344925 | 18319.2 |
| c40 family peptidase | DDQ68_RS10430 | Not Available | Negative | 2345184 - 2345975 | 29001.8 |
| ssra-binding protein smpb | DDQ68_RS10435 | Not Available | Negative | 2346131 - 2346586 | 17396.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
