Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5683 domain-containing protein | DDQ68_RS10335 | Not Available | Positive | 2326730 - 2327455 | 26426.2 |
| 4-hydroxy-tetrahydrodipicolinate reductase | DDQ68_RS10340 | Not Available | Positive | 2327464 - 2328186 | 25436.2 |
| signal peptidase i | DDQ68_RS10345 | Not Available | Positive | 2328295 - 2329479 | 44739.6 |
| uracil-dna glycosylase | DDQ68_RS10350 | Not Available | Negative | 2329722 - 2330384 | 24130.8 |
| co2+/mg2+ efflux protein apag | DDQ68_RS10355 | Not Available | Positive | 2330494 - 2330880 | 14494.3 |
| o-methyltransferase | DDQ68_RS10360 | Not Available | Positive | 2330963 - 2331742 | 28548.1 |
| 3-deoxy-8-phosphooctulonate synthase | DDQ68_RS10365 | Not Available | Negative | 2331831 - 2332691 | 31024.6 |
| methyltransferase domain-containing protein | DDQ68_RS10370 | Not Available | Negative | 2332701 - 2333309 | 22203.5 |
| hypothetical protein | DDQ68_RS10375 | Not Available | Positive | 2333435 - 2334385 | 35730.5 |
| cyanophycin synthetase | DDQ68_RS10380 | Not Available | Negative | 2334672 - 2337311 | 95061.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
