Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | DDQ68_RS10280 | Not Available | Negative | 2314830 - 2316221 | 51683.7 |
| hypothetical protein | DDQ68_RS10290 | Not Available | Negative | 2316550 - 2316810 | 9283.87 |
| hypothetical protein | DDQ68_RS10295 | Not Available | Negative | 2316820 - 2317017 | 6629.23 |
| hypothetical protein | DDQ68_RS22800 | Not Available | Negative | 2317071 - 2317235 | 6058.51 |
| ctp synthase | DDQ68_RS10300 | Not Available | Positive | 2317367 - 2319019 | 60833.2 |
| membrane protein insertase yidc | DDQ68_RS10305 | Not Available | Positive | 2319231 - 2321054 | 67524.0 |
| abc transporter substrate-binding protein | DDQ68_RS10310 | Not Available | Negative | 2321532 - 2323205 | 62671.6 |
| metal-dependent hydrolase | DDQ68_RS10315 | Not Available | Positive | 2323322 - 2324002 | 23885.7 |
| para family protein | DDQ68_RS10320 | Not Available | Positive | 2324191 - 2325000 | 29269.4 |
| parb/repb/spo0j family partition protein | DDQ68_RS10330 | Not Available | Positive | 2325729 - 2326697 | 35816.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
