Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is5/is1182 family transposase | DDQ68_RS24750 | Not Available | Negative | 2204117 - 2204581 | 16680.7 |
| is5/is1182 family transposase | DDQ68_RS23855 | Not Available | Positive | 2204704 - 2205143 | 16031.6 |
| is630 family transposase | DDQ68_RS09750 | Not Available | Negative | 2205157 - 2205762 | 22909.2 |
| helix-turn-helix domain-containing protein | DDQ68_RS23450 | Not Available | Negative | 2205699 - 2206187 | 17592.1 |
| integrase core domain-containing protein | DDQ68_RS09760 | Not Available | Positive | 2206250 - 2206756 | 19574.5 |
| is5/is1182 family transposase | DDQ68_RS09765 | Not Available | Negative | 2206763 - 2206846 | 3438.08 |
| integrase core domain-containing protein | DDQ68_RS09770 | Not Available | Negative | 2206860 - 2207135 | 10673.3 |
| is5/is1182 family transposase | DDQ68_RS24755 | Not Available | Negative | 2207194 - 2207742 | 20917.3 |
| transposase | DDQ68_RS09780 | Not Available | Negative | 2207799 - 2208065 | 9841.66 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | DDQ68_RS09785 | Not Available | Positive | 2208400 - 2208915 | 18923.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
