Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobaltochelatase subunit cobn | DDQ68_RS09690 | Not Available | Negative | 2190725 - 2195020 | 156962.0 |
| hypothetical protein | DDQ68_RS09695 | Not Available | Positive | 2195281 - 2195928 | 23131.8 |
| carboxypeptidase regulatory-like domain-containing protein | DDQ68_RS22780 | Not Available | Positive | 2196390 - 2196695 | 10411.8 |
| 5,6-dimethylbenzimidazole synthase | DDQ68_RS09705 | Not Available | Positive | 2196692 - 2197351 | 24300.5 |
| cobyric acid synthase | DDQ68_RS09710 | Not Available | Positive | 2197395 - 2198867 | 52732.1 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DDQ68_RS09715 | Not Available | Positive | 2198884 - 2199912 | 37414.7 |
| adenosylcobinamide-phosphate synthase cbib | DDQ68_RS09720 | Not Available | Positive | 2199891 - 2200844 | 33981.3 |
| cobyrinate a,c-diamide synthase | DDQ68_RS09725 | Not Available | Negative | 2200809 - 2202164 | 48171.1 |
| hypothetical protein | DDQ68_RS22785 | Not Available | Positive | 2202985 - 2203137 | 5761.31 |
| duf1345 domain-containing protein | DDQ68_RS24270 | Not Available | Negative | 2203831 - 2203968 | 4807.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
