Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen-iii c-methyltransferase | DDQ68_RS09640 | Not Available | Positive | 2178953 - 2179738 | 27740.5 |
| sirohydrochlorin chelatase | DDQ68_RS09645 | Not Available | Positive | 2179746 - 2180684 | 34348.9 |
| precorrin-2 c(20)-methyltransferase | DDQ68_RS09650 | Not Available | Positive | 2180688 - 2181416 | 26414.9 |
| precorrin-3b c(17)-methyltransferase | DDQ68_RS09655 | Not Available | Positive | 2181407 - 2182780 | 49872.9 |
| precorrin-6y c5,15-methyltransferase (decarboxylating) subunit cbie | DDQ68_RS09660 | Not Available | Positive | 2182780 - 2183952 | 42433.3 |
| precorrin-4 c(11)-methyltransferase | DDQ68_RS09665 | Not Available | Positive | 2183966 - 2185846 | 68047.0 |
| precorrin-6a/cobalt-precorrin-6a reductase | DDQ68_RS09670 | Not Available | Positive | 2185888 - 2186661 | 27976.7 |
| cobalt-precorrin-5b (c(1))-methyltransferase | DDQ68_RS09675 | Not Available | Positive | 2186639 - 2187799 | 40492.8 |
| hypothetical protein | DDQ68_RS09680 | Not Available | Positive | 2187796 - 2188494 | 25400.6 |
| magnesium chelatase subunit d family protein | DDQ68_RS09685 | Not Available | Negative | 2188522 - 2190516 | 69892.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
