Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1 family transposase | DDQ68_RS24735 | Not Available | Negative | 2173311 - 2173505 | 7685.62 |
| is5/is1182 family transposase | DDQ68_RS24740 | Not Available | Negative | 2173555 - 2173626 | 2761.3 |
| is1 family transposase | DDQ68_RS24745 | Not Available | Negative | 2173626 - 2174021 | 14469.7 |
| isas1 family transposase | DDQ68_RS09610 | Not Available | Negative | 2174041 - 2174529 | 17996.4 |
| is5/is1182 family transposase | DDQ68_RS09615 | Not Available | Negative | 2174594 - 2175559 | 36313.8 |
| hypothetical protein | DDQ68_RS22775 | Not Available | Positive | 2175740 - 2175898 | 5551.72 |
| transposase | DDQ68_RS09620 | Not Available | Positive | 2176001 - 2177005 | 38492.4 |
| hypothetical protein | DDQ68_RS09625 | Not Available | Negative | 2177009 - 2177254 | 8999.93 |
| (2fe-2s) ferredoxin domain-containing protein | DDQ68_RS09630 | Not Available | Positive | 2177767 - 2178072 | 10783.0 |
| nad-dependent epimerase/dehydratase family protein | DDQ68_RS09635 | Not Available | Positive | 2178118 - 2178966 | 31162.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
