Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chy zinc finger protein | DDQ68_RS24725 | Not Available | Negative | 2144130 - 2144462 | 12032.4 |
| rela/spot family protein | DDQ68_RS09455 | Not Available | Negative | 2144473 - 2146677 | 84445.3 |
| Trna-leu | Not Available | Not Available | Positive | 2146819 - 2146900 | Not Available |
| trigger factor | DDQ68_RS09465 | Not Available | Positive | 2147004 - 2148332 | 49251.0 |
| clpp family protease | DDQ68_RS09470 | Not Available | Positive | 2148480 - 2149187 | 25914.2 |
| atp-dependent clp protease atp-binding subunit clpx | DDQ68_RS09480 | Not Available | Positive | 2149912 - 2151135 | 45579.3 |
| lipid-a-disaccharide synthase | DDQ68_RS09485 | Not Available | Negative | 2151385 - 2152494 | 41917.8 |
| 6-pyruvoyl trahydropterin synthase family protein | DDQ68_RS09490 | Not Available | Negative | 2152567 - 2152980 | 15693.5 |
| adp-glyceromanno-heptose 6-epimerase | DDQ68_RS09495 | Not Available | Positive | 2153110 - 2154078 | 36850.4 |
| fad/nad(p)-binding protein | DDQ68_RS09500 | Not Available | Positive | 2154105 - 2155505 | 48507.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
