Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | Positive | 2134617 - 2134728 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 2134836 - 2137762 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 2137948 - 2138024 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 2138059 - 2138132 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 2138259 - 2139774 | Not Available |
| adenylosuccinate synthase | DDQ68_RS09425 | Not Available | Negative | 2140544 - 2141812 | 46379.5 |
| stas domain-containing protein | DDQ68_RS09430 | Not Available | Negative | 2141909 - 2142262 | 12323.1 |
| is5/is1182 family transposase | DDQ68_RS09435 | Not Available | Negative | 2142259 - 2142567 | 11551.8 |
| transposase | DDQ68_RS24420 | Not Available | Negative | 2142561 - 2143673 | 41807.3 |
| is5/is1182 family transposase | DDQ68_RS23835 | Not Available | Negative | 2143750 - 2143932 | 7051.49 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
