Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is630 family transposase | DDQ68_RS09350 | Not Available | Positive | 2125354 - 2126061 | 26700.2 |
| polyprenol monophosphomannose synthase | DDQ68_RS09355 | Not Available | Negative | 2126186 - 2126965 | 29347.7 |
| protoporphyrinogen oxidase | DDQ68_RS09360 | Not Available | Negative | 2126995 - 2128335 | 46680.7 |
| d-glycero-alpha-d-manno-heptose-1,7- bisphosphate 7-phosphatase | DDQ68_RS09365 | Not Available | Positive | 2128375 - 2128899 | 18729.5 |
| hypothetical protein | DDQ68_RS22760 | Not Available | Negative | 2128976 - 2129131 | 4981.12 |
| arginine decarboxylase | DDQ68_RS09370 | Not Available | Negative | 2129247 - 2130647 | 53713.0 |
| arginase | DDQ68_RS09375 | Not Available | Positive | 2130863 - 2131837 | 36036.8 |
| isas1 family transposase | DDQ68_RS09380 | Not Available | Positive | 2131972 - 2133129 | 42918.5 |
| transposase family protein | DDQ68_RS09385 | Not Available | Positive | 2133489 - 2133992 | 18834.4 |
| transposase family protein | DDQ68_RS09390 | Not Available | Positive | 2133998 - 2134438 | 16413.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
