Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bata domain-containing protein | DDQ68_RS09300 | Not Available | Positive | 2112731 - 2114782 | 74527.6 |
| duf4199 domain-containing protein | DDQ68_RS09305 | Not Available | Positive | 2114849 - 2115403 | 19349.1 |
| duf4199 domain-containing protein | DDQ68_RS09310 | Not Available | Positive | 2115419 - 2115949 | 18606.9 |
| glycosyltransferase family 2 protein | DDQ68_RS09315 | Not Available | Positive | 2115942 - 2116919 | 37103.2 |
| glycosyltransferase | DDQ68_RS09320 | Not Available | Positive | 2117023 - 2118153 | 41326.9 |
| glycosyltransferase family 9 protein | DDQ68_RS09325 | Not Available | Negative | 2118233 - 2119339 | 41331.0 |
| duf5723 family protein | DDQ68_RS09330 | Not Available | Negative | 2119412 - 2120950 | 56050.9 |
| adenylosuccinate lyase | DDQ68_RS09335 | Not Available | Negative | 2121346 - 2122686 | 48795.6 |
| transglycosylase domain-containing protein | DDQ68_RS09340 | Not Available | Positive | 2122805 - 2124925 | 78023.7 |
| helix-turn-helix domain-containing protein | DDQ68_RS24720 | Not Available | Positive | 2125128 - 2125373 | 8767.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
