Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is5 family transposase | DDQ68_RS09250 | Not Available | Positive | 2103387 - 2103842 | 16147.1 |
| hypothetical protein | DDQ68_RS23825 | Not Available | Negative | 2104180 - 2104458 | 10710.0 |
| rela/spot domain-containing protein | DDQ68_RS09260 | Not Available | Negative | 2105036 - 2105338 | 11163.3 |
| hypothetical protein | DDQ68_RS09265 | Not Available | Negative | 2105733 - 2106194 | 17064.5 |
| type ii toxin-antitoxin system higb family toxin | DDQ68_RS09270 | Not Available | Negative | 2106255 - 2106557 | 11798.1 |
| arginine--trna ligase | DDQ68_RS09275 | Not Available | Positive | 2106893 - 2108686 | 65513.3 |
| tigr00730 family rossman fold protein | DDQ68_RS09280 | Not Available | Positive | 2108844 - 2109425 | 20521.0 |
| glutathione peroxidase | DDQ68_RS09285 | Not Available | Positive | 2109512 - 2110096 | 21157.5 |
| 1,4-dihydroxy-2-naphthoate polyprenyltransferase | DDQ68_RS09290 | Not Available | Positive | 2110251 - 2111156 | 31882.6 |
| is5 family transposase | DDQ68_RS09295 | Not Available | Positive | 2111548 - 2112315 | 29027.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
