Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase | DDQ68_RS08825 | Not Available | Negative | 2024142 - 2025890 | 59267.7 |
| histidine phosphatase family protein | DDQ68_RS08830 | Not Available | Negative | 2025984 - 2026601 | 22766.1 |
| hotdog fold thioesterase | DDQ68_RS08835 | Not Available | Positive | 2026710 - 2027126 | 14674.8 |
| chorismate-binding protein | DDQ68_RS08840 | Not Available | Positive | 2027221 - 2028453 | 44219.4 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | DDQ68_RS08845 | Not Available | Positive | 2028609 - 2030366 | 63794.8 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | DDQ68_RS08850 | Not Available | Positive | 2030464 - 2031288 | 29999.2 |
| hypothetical protein | DDQ68_RS08855 | Not Available | Negative | 2031541 - 2031720 | 6604.98 |
| hypothetical protein | DDQ68_RS08860 | Not Available | Positive | 2031894 - 2032343 | 16303.4 |
| amp-binding protein | DDQ68_RS08865 | Not Available | Positive | 2032397 - 2033527 | 40121.5 |
| duf481 domain-containing protein | DDQ68_RS08875 | Not Available | Positive | 2033524 - 2034393 | 31517.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
