Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6624 domain-containing protein | DDQ68_RS08675 | Not Available | Negative | 1992381 - 1993040 | 24378.5 |
| hypothetical protein | DDQ68_RS08680 | Not Available | Negative | 1993214 - 1993696 | 16712.7 |
| threonine aldolase family protein | DDQ68_RS08685 | Not Available | Positive | 1993877 - 1994923 | 37052.4 |
| cation:proton antiporter | DDQ68_RS08690 | Not Available | Positive | 1995075 - 1996346 | 44410.6 |
| metallophosphoesterase | DDQ68_RS08695 | Not Available | Positive | 1996392 - 1997048 | 24421.7 |
| dna-3-methyladenine glycosylase family protein | DDQ68_RS08700 | Not Available | Positive | 1997173 - 1997823 | 24154.1 |
| 2'-5' rna ligase family protein | DDQ68_RS08705 | Not Available | Negative | 1997972 - 1998514 | 19956.3 |
| smp-30/gluconolactonase/lre family protein | DDQ68_RS08710 | Not Available | Negative | 1998559 - 1999584 | 35719.4 |
| ribosomal protection-like abc-f family protein | DDQ68_RS08715 | Not Available | Positive | 1999720 - 2001630 | 71865.0 |
| hypothetical protein | DDQ68_RS08720 | Not Available | Negative | 2001908 - 2002525 | 23271.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
