Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DDQ68_RS22315 | Not Available | Positive | 187022 - 187174 | 5885.55 |
| sensor histidine kinase | DDQ68_RS00800 | Not Available | Negative | 187389 - 188786 | 50754.5 |
| response regulator transcription factor | DDQ68_RS00805 | Not Available | Negative | 188770 - 189441 | 25035.4 |
| is630 family transposase | DDQ68_RS00810 | Not Available | Negative | 189504 - 190544 | 39674.5 |
| dps family protein | DDQ68_RS00815 | Not Available | Positive | 191006 - 191674 | 24670.4 |
| hepn domain-containing protein | DDQ68_RS00820 | Not Available | Negative | 191873 - 192685 | 31235.8 |
| urease subunit beta | DDQ68_RS00825 | Not Available | Negative | 192752 - 193309 | 20337.1 |
| hypothetical protein | DDQ68_RS00830 | Not Available | Positive | 193639 - 194052 | 14778.9 |
| cusa/czca family heavy metal efflux rnd transporter | DDQ68_RS00835 | Not Available | Positive | 194147 - 198745 | 165049.0 |
| efflux rnd transporter periplasmic adaptor subunit | DDQ68_RS00840 | Not Available | Positive | 198994 - 200196 | 43180.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
