Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf58 domain-containing protein | DDQ68_RS08575 | Not Available | Positive | 1977362 - 1978264 | 33221.2 |
| hypothetical protein | DDQ68_RS08580 | Not Available | Positive | 1978257 - 1979198 | 33826.5 |
| cpbp family intramembrane glutamic endopeptidase | DDQ68_RS08585 | Not Available | Negative | 1979215 - 1979940 | 26630.4 |
| mosc domain-containing protein | DDQ68_RS08590 | Not Available | Positive | 1980066 - 1980716 | 23590.6 |
| vwa domain-containing protein | DDQ68_RS08595 | Not Available | Positive | 1981148 - 1982176 | 37290.3 |
| yggs family pyridoxal phosphate-dependent enzyme | DDQ68_RS08600 | Not Available | Positive | 1982362 - 1983033 | 24447.3 |
| duf423 domain-containing protein | DDQ68_RS08605 | Not Available | Positive | 1983180 - 1983554 | 13023.5 |
| duf1573 domain-containing protein | DDQ68_RS08610 | Not Available | Negative | 1983706 - 1984149 | 14898.0 |
| hypothetical protein | DDQ68_RS08615 | Not Available | Negative | 1984284 - 1984949 | 23515.5 |
| atp-dependent dna helicase | DDQ68_RS08620 | Not Available | Negative | 1985072 - 1986502 | 54538.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
