Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,2-phenylacetyl-coa epoxidase subunit paad | DDQ68_RS08525 | Not Available | Positive | 1964414 - 1964941 | 18858.6 |
| 3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing protein | DDQ68_RS08530 | Not Available | Positive | 1965061 - 1966239 | 42490.4 |
| hydroxyphenylacetyl-coa thioesterase paai | DDQ68_RS08535 | Not Available | Positive | 1966217 - 1966663 | 15362.5 |
| 3-oxoadipyl-coa thiolase | DDQ68_RS08540 | Not Available | Positive | 1966875 - 1968083 | 41755.3 |
| phenylacetic acid degradation bifunctional protein paaz | DDQ68_RS08545 | Not Available | Positive | 1968183 - 1970249 | 74430.4 |
| pas domain-containing protein | DDQ68_RS08550 | Not Available | Positive | 1970832 - 1974092 | 118242.0 |
| mate family efflux transporter | DDQ68_RS08555 | Not Available | Positive | 1974336 - 1975727 | 48406.8 |
| duf922 domain-containing protein | DDQ68_RS08560 | Not Available | Positive | 1975840 - 1976403 | 20636.5 |
| pp_01763 | DDQ68_RS08565 | Not Available | Negative | 1976567 - 1976917 | Not Available |
| duf4296 domain-containing protein | DDQ68_RS08570 | Not Available | Negative | 1976920 - 1977324 | 15147.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
