Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | DDQ68_RS08205 | Not Available | Positive | 1888304 - 1888645 | 13449.2 |
| helix-turn-helix transcriptional regulator | DDQ68_RS08210 | Not Available | Positive | 1888666 - 1888977 | 11600.0 |
| hypothetical protein | DDQ68_RS22695 | Not Available | Positive | 1889132 - 1889716 | 22542.1 |
| is5/is1182 family transposase | DDQ68_RS24695 | Not Available | Negative | 1889729 - 1890545 | 28533.2 |
| hypothetical protein | DDQ68_RS24700 | Not Available | Negative | 1890428 - 1890937 | 18603.4 |
| aaa family atpase | DDQ68_RS23815 | Not Available | Negative | 1891040 - 1892350 | 48042.8 |
| hypothetical protein | DDQ68_RS22700 | Not Available | Positive | 1892443 - 1893345 | 34570.8 |
| hypothetical protein | DDQ68_RS08225 | Not Available | Negative | 1893347 - 1893805 | 16867.9 |
| hypothetical protein | DDQ68_RS23440 | Not Available | Positive | 1893804 - 1893959 | 5532.67 |
| hypothetical protein | DDQ68_RS08230 | Not Available | Positive | 1894143 - 1894871 | 27368.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
