Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cca trna nucleotidyltransferase | DDQ68_RS08160 | Not Available | Negative | 1880051 - 1881490 | 53300.5 |
| family 43 glycosylhydrolase | DDQ68_RS08165 | Not Available | Positive | 1881645 - 1882652 | 37703.9 |
| l-threonylcarbamoyladenylate synthase | DDQ68_RS08170 | Not Available | Negative | 1882661 - 1883233 | 20548.9 |
| methylmalonyl-coa epimerase | DDQ68_RS08175 | Not Available | Negative | 1883375 - 1883797 | 15046.2 |
| iscs subfamily cysteine desulfurase | DDQ68_RS08180 | Not Available | Positive | 1883937 - 1885151 | 44001.0 |
| fe-s cluster assembly scaffold iscu | DDQ68_RS08185 | Not Available | Positive | 1885259 - 1885669 | 14584.4 |
| hesb/isca family protein | DDQ68_RS08190 | Not Available | Positive | 1885844 - 1886170 | 11868.9 |
| hypothetical protein | DDQ68_RS23785 | Not Available | Negative | 1886448 - 1886837 | 14883.8 |
| dna polymerase beta superfamily protein | DDQ68_RS23790 | Not Available | Negative | 1886871 - 1887368 | 18379.1 |
| dna polymerase beta superfamily protein | DDQ68_RS08200 | Not Available | Negative | 1887490 - 1888257 | 28287.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
