Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | DDQ68_RS00750 | Not Available | Negative | 173837 - 174280 | 15556.0 |
| pls/posa family non-ribosomal peptide synthetase | DDQ68_RS00755 | Not Available | Negative | 174695 - 179218 | 161202.0 |
| sensor histidine kinase | DDQ68_RS00760 | Not Available | Positive | 179899 - 181014 | 41324.8 |
| lytr/algr family response regulator transcription factor | DDQ68_RS00765 | Not Available | Positive | 181229 - 181963 | 27136.1 |
| kelch repeat-containing protein | DDQ68_RS00770 | Not Available | Positive | 182200 - 183231 | 36305.9 |
| duf4270 family protein | DDQ68_RS00775 | Not Available | Positive | 183215 - 184558 | 47956.4 |
| atp-binding protein | DDQ68_RS00780 | Not Available | Negative | 184687 - 184839 | 5091.23 |
| sigma 54-interacting transcriptional regulator | DDQ68_RS00785 | Not Available | Negative | 184991 - 185725 | 26841.3 |
| response regulator | DDQ68_RS00790 | Not Available | Negative | 185743 - 186048 | 11071.5 |
| thioredoxin family protein | DDQ68_RS00795 | Not Available | Positive | 186418 - 186861 | 15991.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
