Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exo-beta-n-acetylmuramidase namz domain-containing protein | DDQ68_RS08110 | Not Available | Positive | 1865956 - 1867176 | 43485.4 |
| methionyl-trna formyltransferase | DDQ68_RS08115 | Not Available | Positive | 1867327 - 1868247 | 32733.6 |
| dihydrofolate reductase | DDQ68_RS08120 | Not Available | Positive | 1868377 - 1868874 | 17948.5 |
| gnat family n-acetyltransferase | DDQ68_RS08125 | Not Available | Positive | 1869096 - 1869503 | 15184.5 |
| flgd immunoglobulin-like domain containing protein | DDQ68_RS08130 | Not Available | Negative | 1869587 - 1871128 | 55154.3 |
| is630 family transposase | DDQ68_RS08135 | Not Available | Positive | 1871175 - 1872215 | 39674.5 |
| c25 family cysteine peptidase | DDQ68_RS08140 | Not Available | Negative | 1872171 - 1875299 | 113657.0 |
| porv/porq family protein | DDQ68_RS08145 | Not Available | Negative | 1875369 - 1876484 | 39624.2 |
| padr family transcriptional regulator | DDQ68_RS08150 | Not Available | Positive | 1876790 - 1877137 | 13078.0 |
| pspc domain-containing protein | DDQ68_RS08155 | Not Available | Positive | 1877202 - 1879880 | 94989.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
