Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gliding motility-associated c-terminal domain-containing protein | DDQ68_RS08055 | Not Available | Positive | 1851683 - 1855129 | 116349.0 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | DDQ68_RS08060 | Not Available | Positive | 1855333 - 1856745 | 53594.1 |
| hypothetical protein | DDQ68_RS08065 | Not Available | Positive | 1857170 - 1857544 | 14351.8 |
| thiamine-phosphate kinase | DDQ68_RS08070 | Not Available | Negative | 1857675 - 1858703 | 36501.8 |
| hypothetical protein | DDQ68_RS08075 | Not Available | Positive | 1858867 - 1859487 | 22022.2 |
| phosphate-starvation-inducible psie family protein | DDQ68_RS08080 | Not Available | Positive | 1859801 - 1860262 | 17334.4 |
| m3 family oligoendopeptidase | DDQ68_RS08085 | Not Available | Negative | 1860486 - 1862228 | 66442.6 |
| ferredoxin--nadp reductase | DDQ68_RS08095 | Not Available | Negative | 1862651 - 1863754 | 39312.1 |
| peptidoglycan dd-metalloendopeptidase family protein | DDQ68_RS08100 | Not Available | Positive | 1863920 - 1864606 | 24520.4 |
| abc transporter permease | DDQ68_RS08105 | Not Available | Negative | 1864656 - 1865873 | 45576.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
