Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histone deacetylase | DDQ68_RS07870 | Not Available | Positive | 1807148 - 1808050 | 32589.0 |
| j domain-containing protein | DDQ68_RS07875 | Not Available | Positive | 1808080 - 1809078 | 36181.1 |
| pd-(d/e)xk nuclease-like domain-containing protein | DDQ68_RS07880 | Not Available | Negative | 1809157 - 1809891 | 26831.5 |
| hypothetical protein | DDQ68_RS22685 | Not Available | Negative | 1809966 - 1810283 | 11381.9 |
| eama family transporter | DDQ68_RS07885 | Not Available | Positive | 1810538 - 1810957 | 14191.9 |
| glucose 1-dehydrogenase | DDQ68_RS07890 | Not Available | Positive | 1811097 - 1811897 | 28206.8 |
| mgh1-like glycoside hydrolase domain-containing protein | DDQ68_RS07895 | Not Available | Positive | 1812050 - 1814668 | 98966.5 |
| cyclase family protein | DDQ68_RS07900 | Not Available | Positive | 1814814 - 1815428 | 22481.9 |
| type 1 glutamine amidotransferase domain-containing protein | DDQ68_RS07905 | Not Available | Negative | 1815574 - 1816254 | 23856.4 |
| putative quinol monooxygenase | DDQ68_RS07910 | Not Available | Negative | 1816336 - 1816647 | 11608.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
