Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DDQ68_RS24245 | Not Available | Negative | 1762849 - 1762971 | 4392.57 |
| hypothetical protein | DDQ68_RS07685 | Not Available | Negative | 1762980 - 1763525 | 19439.6 |
| m48 family metallopeptidase | DDQ68_RS07690 | Not Available | Negative | 1763560 - 1764351 | 28964.7 |
| fumarylacetoacetate hydrolase family protein | DDQ68_RS07695 | Not Available | Positive | 1764511 - 1765125 | 22623.2 |
| m23 family metallopeptidase | DDQ68_RS07700 | Not Available | Positive | 1765324 - 1767300 | 71874.5 |
| thioredoxin-dependent thiol peroxidase | DDQ68_RS07705 | Not Available | Positive | 1767403 - 1767852 | 16441.6 |
| vwa domain-containing protein | DDQ68_RS07710 | Not Available | Positive | 1767998 - 1769362 | 49262.1 |
| gldl-related protein | DDQ68_RS07715 | Not Available | Positive | 1769382 - 1769948 | 20559.4 |
| hypothetical protein | DDQ68_RS07720 | Not Available | Negative | 1770017 - 1770325 | 11792.3 |
| rna polymerase sigma factor | DDQ68_RS07725 | Not Available | Positive | 1770734 - 1771279 | 21087.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
