Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | DDQ68_RS07590 | Not Available | Positive | 1735128 - 1735499 | 13851.8 |
| transposase | DDQ68_RS07595 | Not Available | Negative | 1735546 - 1736472 | 34552.5 |
| transposase | DDQ68_RS22675 | Not Available | Negative | 1736676 - 1737134 | 17006.6 |
| hypothetical protein | DDQ68_RS22680 | Not Available | Positive | 1737105 - 1737428 | 11338.7 |
| sdr family nad(p)-dependent oxidoreductase | DDQ68_RS07605 | Not Available | Negative | 1737822 - 1738892 | 37980.5 |
| hypothetical protein | DDQ68_RS07610 | Not Available | Positive | 1739094 - 1739582 | 16767.2 |
| 7tm diverse intracellular signaling domain-containing protein | DDQ68_RS07615 | Not Available | Positive | 1739765 - 1741789 | 76191.0 |
| susc/raga family tonb-linked outer membrane protein | DDQ68_RS07620 | Not Available | Positive | 1742357 - 1745521 | 113259.0 |
| ragb/susd family nutrient uptake outer membrane protein | DDQ68_RS07625 | Not Available | Positive | 1745549 - 1747099 | 56421.4 |
| pkd domain-containing protein | DDQ68_RS07630 | Not Available | Positive | 1747133 - 1747936 | 28200.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
