Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | DDQ68_RS07545 | Not Available | Positive | 1727033 - 1727527 | 18297.1 |
| is1 family transposase | DDQ68_RS07550 | Not Available | Negative | 1727529 - 1727987 | 18239.4 |
| is1 family transposase | DDQ68_RS22670 | Not Available | Negative | 1727926 - 1728258 | 11764.3 |
| hypothetical protein | DDQ68_RS07555 | Not Available | Positive | 1728635 - 1728952 | 11269.0 |
| hypothetical protein | DDQ68_RS07560 | Not Available | Negative | 1729050 - 1729325 | 10194.4 |
| hypothetical protein | DDQ68_RS07565 | Not Available | Positive | 1729457 - 1729786 | 11623.7 |
| dna-formamidopyrimidine glycosylase | DDQ68_RS07570 | Not Available | Negative | 1729783 - 1730613 | 30345.4 |
| s9 family peptidase | DDQ68_RS07575 | Not Available | Negative | 1730749 - 1732920 | 80066.2 |
| membrane-binding protein | DDQ68_RS07580 | Not Available | Negative | 1732996 - 1733901 | 31864.5 |
| polyphosphate kinase 2 family protein | DDQ68_RS07585 | Not Available | Positive | 1734095 - 1734919 | 31115.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
